Usage Guide
===========

The **command line tools** are the most powerful and flexible way to use FermiLink. They provide direct access to all features and support multiple modes: one-shot execution, interactive chat, autonomous loops, and full research or reproduction workflows.

.. toctree::
   :maxdepth: 1

   Command Line Tools <usage>
   Web UI <usage_web_ui>
   Chat Apps <usage_chatting_apps>
   Built-In Scientific Package Management <scientific_packages>
   Configure Your Package <usage_configure_your_package>
   Reusable Research Pipelines and Memory <usage_advanced_configuration>

For a list of the supported built-in scientific packages, check

.. toctree::
   :maxdepth: 1

   List of Built-in Scientific Packages <built_in_scientific_packages>


General usage tips
~~~~~~~~~~~~~~~~~~~~~~~

- :doc:`usage_web_ui`: If you want a more user-friendly interface for quick experiments or demos in research or teaching. 

- :doc:`usage_chatting_apps`: If you want a remote control of your laptop, workstation, or HPC from your phone and schedule computing tasks before sleeping or travel.

- :doc:`built_in_scientific_packages`: If you want to know more about the built-in scientific packages supported by FermiLink. 

- :doc:`usage_configure_your_package`: If you want to use your own local custom package for FermiLink.

- :doc:`usage_advanced_configuration`: If you want to add research data, pipelines in papers, or group secrets to your local FermiLink workspace.